Endometriosis Knowledgebase


A repository for genes associated with endometriosis

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Gene id 196
Gene Summary     SNPs    Protein Summary    Gene ontology    KEGG pathways    Diseases    PubMed references    

Gene Summary

Gene Symbol AHR   Gene   UCSC   Ensembl
Aliases bHLHe76
Gene name aryl hydrocarbon receptor
Alternate names aryl hydrocarbon receptor, AH-receptor, ah receptor, aromatic hydrocarbon receptor, class E basic helix-loop-helix protein 76,
Gene location 7p21.1 (17298651: 17346150)     Exons: 11     NC_000007.14
Gene summary(Entrez) The protein encoded by this gene is a ligand-activated helix-loop-helix transcription factor involved in the regulation of biological responses to planar aromatic hydrocarbons. This receptor has been shown to regulate xenobiotic-metabolizing enzymes such as cytochrome P450. Before ligand binding, the encoded protein is sequestered in the cytoplasm; upon ligand binding, this protein moves to the nucleus and stimulates transcription of target genes. [provided by RefSeq, Sep 2015]
OMIM 600253

SNPs

rs2040623

Strand:    Allele origin:   Allele change: G/T   Mutation type: snp

CM000669.2   g.17341038A>C
NC_000007.13   g.17380662A>C
NC_000007.14   g.17341038A>C
NM_001621.4   c.2403+810A>C
rs2066853

Strand:    Allele origin:   Allele change: A/G   Mutation type: snp

CM000669.2   g.17339486G>A
NC_000007.13   g.17379110G>A
NC_000007.14   g.17339486G>A
NM_001621.4   c.1661G>A
NP_001612.1   p.Arg554Lys
rs2106728

Strand:    Allele origin:   Allele change: A/G   Mutation type: snp

CM000669.2   g.17342116T>C
NC_000007.13   g.17381740T>C
NC_000007.14   g.17342116T>C
NM_001621.4   c.2404-805T>C
rs2282883

Strand:    Allele origin:   Allele change: A/C/G   Mutation type: snp

CM000669.2   g.17316723T>C
CM000669.2   g.17316723T>G
NC_000007.13   g.17356347T>C
NC_000007.14   g.17316723T>C
NC_000007.14   g.17316723T>G
NM_001621.4   c.254-5778T>C
NM_001621.4   c.254-5778T>G
rs713150

Strand:    Allele origin:   Allele change: C/G/T   Mutation type: snp

CM000669.2   g.17300533G>C
CM000669.2   g.17300533G>T
NC_000007.13   g.17340157G>C
NC_000007.14   g.17300533G>C
NC_000007.14   g.17300533G>T
NM_001621.4   c.65+1204G>C
NM_001621.4   c.65+1204G>T
XR_242133.1   n.-1415C>G
XR_927073.2   n.-1995C>A
XR_927073.2   n.-1995C>G

Protein Summary

Protein general information P35869  

Name: Aryl hydrocarbon receptor (Ah receptor) (AhR) (Class E basic helix loop helix protein 76) (bHLHe76)

Length: 848  Mass: 96,147

Tissue specificity: Expressed in all tissues tested including blood, brain, heart, kidney, liver, lung, pancreas and skeletal muscle. {ECO

Sequence MNSSSANITYASRKRRKPVQKTVKPIPAEGIKSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVS
YLRAKSFFDVALKSSPTERNGGQDNCRAANFREGLNLQEGEFLLQALNGFVLVVTTDALVFYASSTIQDYLGFQQ
SDVIHQSVYELIHTEDRAEFQRQLHWALNPSQCTESGQGIEEATGLPQTVVCYNPDQIPPENSPLMERCFICRLR
CLLDNSSGFLAMNFQGKLKYLHGQKKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFTPIGC
DAKGRIVLGYTEAELCTRGSGYQFIHAADMLYCAESHIRMIKTGESGMIVFRLLTKNNRWTWVQSNARLLYKNGR
PDYIIVTQRPLTDEEGTEHLRKRNTKLPFMFTTGEAVLYEATNPFPAIMDPLPLRTKNGTSGKDSATTSTLSKDS
LNPSSLLAAMMQQDESIYLYPASSTSSTAPFENNFFNESMNECRNWQDNTAPMGNDTILKHEQIDQPQDVNSFAG
GHPGLFQDSKNSDLYSIMKNLGIDFEDIRHMQNEKFFRNDFSGEVDFRDIDLTDEILTYVQDSLSKSPFIPSDYQ
QQQSLALNSSCMVQEHLHLEQQQQHHQKQVVVEPQQQLCQKMKHMQVNGMFENWNSNQFVPFNCPQQDPQQYNVF
TDLHGISQEFPYKSEMDSMPYTQNFISCNQPVLPQHSKCTELDYPMGSFEPSPYPTTSSLEDFVTCLQLPENQKH
GLNPQSAIITPQTCYAGAVSMYQCQPEPQHTHVGQMQYNPVLPGQQAFLNKFQNGVLNETYPAELNNINNTQTTT
HLQPLHHPSEARPFPDLTSSGFL
Structural information
Protein Domains
bHLH. (27-80)
PAS (111-181)
PAS (275-342)
PAC. (348-386)
Interpro:  IPR033348 IPR011598 IPR001610 IPR000014 IPR013767 IPR013655
Prosite:   PS50888 PS50112

Pfam:  
PF00010 PF00989 PF08447
CDD:   cd00083 cd00130

DIP:  
946
MINT:   6597538
STRING:   ENSP00000242057;
Other Databases GeneCards:  AHR;  Malacards:  AHR

Gene ontology


GO accessionTerm nameEvidence codeGo category
GO:0001541 ovarian follicle developm
ent
IEA biological_process
GO:0001568 blood vessel development
NAS biological_process
GO:0003677 DNA binding
IDA molecular_function
GO:0003677 DNA binding
TAS molecular_function
GO:0003700 transcription factor acti
vity, sequence-specific D
NA binding
IDA molecular_function
GO:0004874 aryl hydrocarbon receptor
activity
IEA molecular_function
GO:0004879 RNA polymerase II transcr
iption factor activity, l
igand-activated sequence-
specific DNA binding
IDA molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005634 nucleus
IDA cellular_component
GO:0005634 nucleus
IDA cellular_component
GO:0005634 nucleus
IDA cellular_component
GO:0005654 nucleoplasm
IDA cellular_component
GO:0005667 transcription factor comp
lex
TAS cellular_component
GO:0005737 cytoplasm
IDA cellular_component
GO:0005737 cytoplasm
IDA cellular_component
GO:0006355 regulation of transcripti
on, DNA-templated
IDA biological_process
GO:0006357 regulation of transcripti
on from RNA polymerase II
promoter
IDA biological_process
GO:0006366 transcription from RNA po
lymerase II promoter
IDA biological_process
GO:0006805 xenobiotic metabolic proc
ess
TAS biological_process
GO:0006915 apoptotic process
TAS biological_process
GO:0007049 cell cycle
IEA biological_process
GO:0008134 transcription factor bind
ing
IPI molecular_function
GO:0009410 response to xenobiotic st
imulus
IDA biological_process
GO:0009636 response to toxic substan
ce
IDA biological_process
GO:0010468 regulation of gene expres
sion
IDA biological_process
GO:0030522 intracellular receptor si
gnaling pathway
IEA biological_process
GO:0030888 regulation of B cell prol
iferation
IDA biological_process
GO:0032355 response to estradiol
IEA biological_process
GO:0032922 circadian regulation of g
ene expression
ISS biological_process
GO:0034752 cytosolic aryl hydrocarbo
n receptor complex
TAS cellular_component
GO:0034753 nuclear aryl hydrocarbon
receptor complex
IBA cellular_component
GO:0035326 enhancer binding
IDA molecular_function
GO:0044212 transcription regulatory
region DNA binding
IDA molecular_function
GO:0045892 negative regulation of tr
anscription, DNA-template
d
ISS biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
ISS biological_process
GO:0045944 positive regulation of tr
anscription from RNA poly
merase II promoter
IBA biological_process
GO:0046982 protein heterodimerizatio
n activity
TAS molecular_function
GO:0046983 protein dimerization acti
vity
TAS molecular_function
GO:0051879 Hsp90 protein binding
IDA molecular_function
GO:0070888 E-box binding
ISS molecular_function
GO:0071385 cellular response to gluc
ocorticoid stimulus
IEA biological_process
GO:0001541 ovarian follicle developm
ent
IEA biological_process
GO:0001568 blood vessel development
NAS biological_process
GO:0003677 DNA binding
IEA molecular_function
GO:0003677 DNA binding
IDA molecular_function
GO:0003677 DNA binding
TAS molecular_function
GO:0003677 DNA binding
TAS molecular_function
GO:0003700 transcription factor acti
vity, sequence-specific D
NA binding
IEA molecular_function
GO:0003700 transcription factor acti
vity, sequence-specific D
NA binding
IDA molecular_function
GO:0003700 transcription factor acti
vity, sequence-specific D
NA binding
NAS molecular_function
GO:0004874 aryl hydrocarbon receptor
activity
IEA molecular_function
GO:0004874 aryl hydrocarbon receptor
activity
IEA molecular_function
GO:0004879 RNA polymerase II transcr
iption factor activity, l
igand-activated sequence-
specific DNA binding
IDA molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005634 nucleus
IEA cellular_component
GO:0005634 nucleus
IEA cellular_component
GO:0005634 nucleus
IEA cellular_component
GO:0005634 nucleus
IDA cellular_component
GO:0005634 nucleus
IDA cellular_component
GO:0005634 nucleus
IDA cellular_component
GO:0005634 nucleus
TAS cellular_component
GO:0005654 nucleoplasm
IDA cellular_component
GO:0005667 transcription factor comp
lex
TAS cellular_component
GO:0005737 cytoplasm
IEA cellular_component
GO:0005737 cytoplasm
IEA cellular_component
GO:0005737 cytoplasm
IDA cellular_component
GO:0005737 cytoplasm
IDA cellular_component
GO:0005829 cytosol
IEA cellular_component
GO:0006351 transcription, DNA-templa
ted
IEA biological_process
GO:0006355 regulation of transcripti
on, DNA-templated
IEA biological_process
GO:0006355 regulation of transcripti
on, DNA-templated
IEA biological_process
GO:0006355 regulation of transcripti
on, DNA-templated
IDA biological_process
GO:0006357 regulation of transcripti
on from RNA polymerase II
promoter
IDA biological_process
GO:0006366 transcription from RNA po
lymerase II promoter
IDA biological_process
GO:0006805 xenobiotic metabolic proc
ess
TAS biological_process
GO:0006915 apoptotic process
TAS biological_process
GO:0007049 cell cycle
IEA biological_process
GO:0008134 transcription factor bind
ing
IPI molecular_function
GO:0009410 response to xenobiotic st
imulus
IEA biological_process
GO:0009410 response to xenobiotic st
imulus
IDA biological_process
GO:0009636 response to toxic substan
ce
IDA biological_process
GO:0010468 regulation of gene expres
sion
IDA biological_process
GO:0014070 response to organic cycli
c compound
IEA biological_process
GO:0030522 intracellular receptor si
gnaling pathway
IEA biological_process
GO:0030888 regulation of B cell prol
iferation
IDA biological_process
GO:0032355 response to estradiol
IEA biological_process
GO:0032922 circadian regulation of g
ene expression
ISS biological_process
GO:0034751 aryl hydrocarbon receptor
complex
IEA cellular_component
GO:0034752 cytosolic aryl hydrocarbo
n receptor complex
TAS cellular_component
GO:0034753 nuclear aryl hydrocarbon
receptor complex
IBA cellular_component
GO:0035326 enhancer binding
IDA molecular_function
GO:0044212 transcription regulatory
region DNA binding
IDA molecular_function
GO:0045892 negative regulation of tr
anscription, DNA-template
d
ISS biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
ISS biological_process
GO:0045944 positive regulation of tr
anscription from RNA poly
merase II promoter
IBA biological_process
GO:0046982 protein heterodimerizatio
n activity
TAS molecular_function
GO:0046983 protein dimerization acti
vity
IEA molecular_function
GO:0046983 protein dimerization acti
vity
TAS molecular_function
GO:0048511 rhythmic process
IEA biological_process
GO:0051879 Hsp90 protein binding
IDA molecular_function
GO:0070888 E-box binding
ISS molecular_function
GO:0071385 cellular response to gluc
ocorticoid stimulus
IEA biological_process
GO:0001568 blood vessel development
NAS biological_process
GO:0003677 DNA binding
IDA molecular_function
GO:0003677 DNA binding
TAS molecular_function
GO:0003677 DNA binding
TAS molecular_function
GO:0003700 transcription factor acti
vity, sequence-specific D
NA binding
IDA molecular_function
GO:0003700 transcription factor acti
vity, sequence-specific D
NA binding
NAS molecular_function
GO:0004879 RNA polymerase II transcr
iption factor activity, l
igand-activated sequence-
specific DNA binding
IDA molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005515 protein binding
IPI molecular_function
GO:0005634 nucleus
IDA cellular_component
GO:0005634 nucleus
IDA cellular_component
GO:0005634 nucleus
IDA cellular_component
GO:0005634 nucleus
TAS cellular_component
GO:0005654 nucleoplasm
IDA cellular_component
GO:0005667 transcription factor comp
lex
TAS cellular_component
GO:0005737 cytoplasm
IDA cellular_component
GO:0005737 cytoplasm
IDA cellular_component
GO:0006355 regulation of transcripti
on, DNA-templated
IDA biological_process
GO:0006357 regulation of transcripti
on from RNA polymerase II
promoter
IDA biological_process
GO:0006366 transcription from RNA po
lymerase II promoter
IDA biological_process
GO:0006805 xenobiotic metabolic proc
ess
TAS biological_process
GO:0006915 apoptotic process
TAS biological_process
GO:0008134 transcription factor bind
ing
IPI molecular_function
GO:0009410 response to xenobiotic st
imulus
IDA biological_process
GO:0009636 response to toxic substan
ce
IDA biological_process
GO:0010468 regulation of gene expres
sion
IDA biological_process
GO:0030888 regulation of B cell prol
iferation
IDA biological_process
GO:0032922 circadian regulation of g
ene expression
ISS biological_process
GO:0034752 cytosolic aryl hydrocarbo
n receptor complex
TAS cellular_component
GO:0034753 nuclear aryl hydrocarbon
receptor complex
IBA cellular_component
GO:0035326 enhancer binding
IDA molecular_function
GO:0044212 transcription regulatory
region DNA binding
IDA molecular_function
GO:0045892 negative regulation of tr
anscription, DNA-template
d
ISS biological_process
GO:0045893 positive regulation of tr
anscription, DNA-template
d
ISS biological_process
GO:0045944 positive regulation of tr
anscription from RNA poly
merase II promoter
IBA biological_process
GO:0046982 protein heterodimerizatio
n activity
TAS molecular_function
GO:0046983 protein dimerization acti
vity
TAS molecular_function
GO:0051879 Hsp90 protein binding
IDA molecular_function
GO:0070888 E-box binding
ISS molecular_function

KEGG pathways

hsa04659  Th17 cell differentiation

Diseases

Associated diseases References
Alzheimer's disease PMID: 19141999
Azoospermia PMID: 15474075
Cancer PMID: 16103451
Chronic obstructive pulmonary disease (COPD) PMID: 19625176
Cryptorchidism PMID: 22648180
Dementia PMID: 12852830
Endometrial cancer PMID: 23208493
Endometriosis PMID: 11393538
Hypospadias PMID: 22648180
Macular degeneration PMID: 15774926
Male infertility PMID: 21689841
Micropenis PMID: 15758562
Myocardial infarction PMID: 17053541
Oligozoospermia PMID: 15474075
Endometriosis INFBASE22017422

PubMed references


PMID Condition Mutation Ethnicity Population details Infertility_type Associated_genes Abstract
23141164 Endometrio
sis
GG + AG [from AhR -1661G/A (GG) and GSTP1 -313A/G (AG)] Han Chi
nese
925 (432 endome
triosis patient
s, 493 patients
with fallopian
tube ligation,
tubal recanali
zation, laparos
copic hydrotuba
tion, benign ov
arian tumor and
teratoma surge
ries without en
dometriosis as
control group )
AhR
GSTP1
Show abstract
22017422 Endometrio
sis
Taiwane
se Han

CYP1A1
CYP1B1
GSTM1
GSTT1
GSTP1
AhR
ARNT
and AhRR
Show abstract